Liens et base de données sur les microarrays

Microarrays
STANFORD : MicroarraysGO
Microarrays data analysis bibliography (Rockefeller)GO
ENS description microarrays, links, and data GO
GRID IT: Resources for Microarray ResearchGO
Stanford NCI60 Cancer Microarray Project Search GO
NCGRGO
NHGRI Microarray Project: Home PageGO
GeneChip(R) Information SystemsGO
Microarrays.org GO
GeneX project of NCGR GO
TIGR GO
Arabidopsis gene expression information GO
Yeast Genome Annotation GO
NHGRI ArrayDB GO
Biochips technology at Aix-Marseille II university (slide show) GO

Données d'expression
Raw data from Stanford staff (levure : face 2) GO
Expression data human and yeast (MIT) GO
ENS Data GO
Raw data  de Saeed Tavazoie et al. GO
Saeed Tavazoie et al. (Nature Genetics 22: 281-285) GO

Algorithmes
Rockefeller web siteGO
"DNA Microarray Web Site (Leming Shi, Ph.D.)"GO
Le BionetbookGO
Clustering algorithme Sherlock G GO
Clustering algorithme Peter Feng GO
Clustering : Support Vector MachinesGO
Data treatement before clusteringGO

Bases de données
TIGR The Institute of Genomic Research GO
ExPASy - Molecular Biology ServerGO
PDB - Protein Data BankGO
SCOP - Structural Classification of ProteinsGO
ProDom - Protein Domain DatabaseGO
HUSAR - The Web Interface to the HUSAR Analysis PackageGO
EMBL - European Molecular Biology LaboratoryGO
SEQNET - Sequenz NetworkGO
ECDC - E. coli DatabaseGO
VectorDB - Molecular Biology Vector Sequence DatabaseGO
Caenorhabditis elegans Genome DataGO
MIPS HomeGO
EBI - Euroean Bioinformatics Institute GO
NCBI- National Center for Biotechnologie InformationGO
GenedocGO
Serva - Electrophoresis GmbHGO
Jalview - a java multiple alignment editorGO
yMGVGO
SGD "Standford genome Data Base"GO

Logiciels
t-profiler : test en ligne des changements significatifs dans des groupes de gènes prédéfinisGO
TMeV : logiciel en Java (mulitplate-formes) pour clustering et autres traitements statistiques des données transcriptomeGO
NCGR : Database and toolsGO
GeneCluster MIT softwareGO
EPclust : clustering at EBIGO
GRID IT : Microarrays WebsitesGO
BioDiscovery| GeneSightGO
LION Bioscience - Genomics. Informatics. Solutions.GO
BIOSCI SearchGO
DoubleTwistGO
Welcome to Imaging Research Inc.GO
GeneSpring : software for gene expression visualization and analysisGO
Genomics and Bioinformatics GroupGO
Spotfire - Welcome to SpotfireGO
Arabidopsis Labs, Stock Centers and Other DatabasesGO

Autres liens
Related Web Links - The Institute for Genomic ResearchGO
Links - Microarray Group @ Manchester Bioinformatics (University of Manchester)GO
IMPG - Informatics, Mathematics and Physics for GenomicsGO
BLAST : similarity between sequence and data bankGO
Expression Profiler (Jaak Vilo, EBI)GO
Clustalw : multiple alignmentGO
Knowledge-based Analysis of Microarray Gene Expression Data Using Support Vector MachinesGO
MIPS - Saccharomyces cerevisiae - Functional CategoriesGO
On differential variability of expression ratios: Improving statistical inference about gene expression changes from microarray dataGO
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Intranet Dernière mise à jour : 16 Decembre 2010